Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim37Q6PCX9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Gm6550-201ENSMUST00000187574 993 ntBASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Chchd1-203ENSMUST00000224633 557 ntBASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim37Q6PCX9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Gm14701-201ENSMUST00000117156 348 ntBASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Gm29707-201ENSMUST00000196325 491 ntBASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim37Q6PCX9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Gm13036-201ENSMUST00000117799 748 ntBASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim37Q6PCX9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trim37Q6PCX9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.52■□□□□ 0.39
Trim37Q6PCX9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim37Q6PCX9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim37Q6PCX9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim37Q6PCX9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim37Q6PCX9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim37Q6PCX9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms