Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Gm13597-201ENSMUST00000121239 375 ntBASIC19.96■□□□□ 0.79
Clcn1Q64347 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.96■□□□□ 0.79
Clcn1Q64347 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Clcn1Q64347 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.96■□□□□ 0.79
Clcn1Q64347 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn1Q64347 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.96■□□□□ 0.79
Clcn1Q64347 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.96■□□□□ 0.79
Clcn1Q64347 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.96■□□□□ 0.79
Clcn1Q64347 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Clcn1Q64347 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.95■□□□□ 0.78
Clcn1Q64347 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Clcn1Q64347 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.95■□□□□ 0.78
Clcn1Q64347 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.95■□□□□ 0.78
Clcn1Q64347 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.95■□□□□ 0.78
Clcn1Q64347 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Clcn1Q64347 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Clcn1Q64347 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn1Q64347 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Clcn1Q64347 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.94■□□□□ 0.78
Clcn1Q64347 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Clcn1Q64347 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Clcn1Q64347 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Gm37153-201ENSMUST00000193637 231 ntBASIC19.94■□□□□ 0.78
Clcn1Q64347 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.94■□□□□ 0.78
Clcn1Q64347 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Clcn1Q64347 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Clcn1Q64347 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clcn1Q64347 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn1Q64347 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Clcn1Q64347 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Gm44492-201ENSMUST00000197012 141 ntBASIC19.93■□□□□ 0.78
Clcn1Q64347 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Clcn1Q64347 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Clcn1Q64347 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Clcn1Q64347 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.93■□□□□ 0.78
Clcn1Q64347 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn1Q64347 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clcn1Q64347 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn1Q64347 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clcn1Q64347 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn1Q64347 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn1Q64347 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.92■□□□□ 0.78
Clcn1Q64347 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms