Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Six2Q62232 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.85■□□□□ 0.29
Six2Q62232 Gm15165-201ENSMUST00000118140 502 ntBASIC16.85■□□□□ 0.29
Six2Q62232 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.85■□□□□ 0.29
Six2Q62232 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.85■□□□□ 0.29
Six2Q62232 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.84■□□□□ 0.29
Six2Q62232 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six2Q62232 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six2Q62232 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Six2Q62232 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Six2Q62232 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six2Q62232 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Six2Q62232 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Six2Q62232 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Six2Q62232 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.84■□□□□ 0.29
Six2Q62232 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six2Q62232 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six2Q62232 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Six2Q62232 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Six2Q62232 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six2Q62232 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six2Q62232 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six2Q62232 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Six2Q62232 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Six2Q62232 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Six2Q62232 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.83■□□□□ 0.28
Six2Q62232 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Gm25745-201ENSMUST00000174945 133 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Six2Q62232 Gm8825-201ENSMUST00000182565 998 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm4518-201ENSMUST00000182638 718 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Six2Q62232 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.83■□□□□ 0.28
Six2Q62232 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.83■□□□□ 0.28
Six2Q62232 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six2Q62232 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Six2Q62232 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.82■□□□□ 0.28
Six2Q62232 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Six2Q62232 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Six2Q62232 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Six2Q62232 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Six2Q62232 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Six2Q62232 Gm9172-201ENSMUST00000212092 954 ntBASIC16.82■□□□□ 0.28
Six2Q62232 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.82■□□□□ 0.28
Six2Q62232 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.82■□□□□ 0.28
Six2Q62232 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Six2Q62232 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.82■□□□□ 0.28
Six2Q62232 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Six2Q62232 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Six2Q62232 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms