Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccne1Q61457 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ccne1Q61457 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccne1Q61457 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccne1Q61457 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ccne1Q61457 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.5■□□□□ 0.87
Ccne1Q61457 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.5■□□□□ 0.87
Ccne1Q61457 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.5■□□□□ 0.87
Ccne1Q61457 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 Gm5177-201ENSMUST00000183092 997 ntBASIC20.5■□□□□ 0.87
Ccne1Q61457 Gm10576-201ENSMUST00000191927 825 ntBASIC20.5■□□□□ 0.87
Ccne1Q61457 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.5■□□□□ 0.87
Ccne1Q61457 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccne1Q61457 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccne1Q61457 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ccne1Q61457 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccne1Q61457 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ccne1Q61457 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccne1Q61457 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ccne1Q61457 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.49■□□□□ 0.87
Ccne1Q61457 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ccne1Q61457 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ccne1Q61457 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.48■□□□□ 0.87
Ccne1Q61457 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ccne1Q61457 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ccne1Q61457 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Ccne1Q61457 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.48■□□□□ 0.87
Ccne1Q61457 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.48■□□□□ 0.87
Ccne1Q61457 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccne1Q61457 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ccne1Q61457 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccne1Q61457 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Ccne1Q61457 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccne1Q61457 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ccne1Q61457 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ccne1Q61457 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccne1Q61457 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccne1Q61457 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Ccne1Q61457 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccne1Q61457 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccne1Q61457 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.47■□□□□ 0.87
Ccne1Q61457 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ccne1Q61457 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.46■□□□□ 0.87
Ccne1Q61457 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccne1Q61457 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 AC155252.2-201ENSMUST00000226946 680 ntBASIC20.46■□□□□ 0.87
Ccne1Q61457 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ccne1Q61457 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccne1Q61457 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccne1Q61457 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccne1Q61457 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccne1Q61457 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccne1Q61457 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccne1Q61457 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccne1Q61457 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccne1Q61457 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.45■□□□□ 0.86
Ccne1Q61457 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccne1Q61457 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms