Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.57□□□□□ -0.24
Clns1aQ61189 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clns1aQ61189 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
Clns1aQ61189 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.57□□□□□ -0.24
Clns1aQ61189 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Clns1aQ61189 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.56□□□□□ -0.24
Clns1aQ61189 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.56□□□□□ -0.24
Clns1aQ61189 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Clns1aQ61189 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clns1aQ61189 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Clns1aQ61189 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.56□□□□□ -0.24
Clns1aQ61189 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.56□□□□□ -0.24
Clns1aQ61189 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Gm38027-201ENSMUST00000192315 235 ntBASIC13.56□□□□□ -0.24
Clns1aQ61189 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clns1aQ61189 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.55□□□□□ -0.24
Clns1aQ61189 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.55□□□□□ -0.24
Clns1aQ61189 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.55□□□□□ -0.24
Clns1aQ61189 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms