Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Irf9Q61179 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.64■□□□□ 0.73
Irf9Q61179 Gm4899-201ENSMUST00000178708 719 ntBASIC19.64■□□□□ 0.73
Irf9Q61179 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.64■□□□□ 0.73
Irf9Q61179 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.64■□□□□ 0.73
Irf9Q61179 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Irf9Q61179 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Irf9Q61179 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.64■□□□□ 0.73
Irf9Q61179 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Irf9Q61179 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Irf9Q61179 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Irf9Q61179 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf9Q61179 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.63■□□□□ 0.73
Irf9Q61179 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Gm11594-201ENSMUST00000122313 162 ntBASIC19.63■□□□□ 0.73
Irf9Q61179 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Irf9Q61179 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
Irf9Q61179 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Irf9Q61179 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf9Q61179 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Irf9Q61179 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.62■□□□□ 0.73
Irf9Q61179 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.62■□□□□ 0.73
Irf9Q61179 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.62■□□□□ 0.73
Irf9Q61179 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Irf9Q61179 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Irf9Q61179 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.62■□□□□ 0.73
Irf9Q61179 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Irf9Q61179 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf9Q61179 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Gm14494-201ENSMUST00000118786 435 ntBASIC19.61■□□□□ 0.73
Irf9Q61179 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.61■□□□□ 0.73
Irf9Q61179 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.61■□□□□ 0.73
Irf9Q61179 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.61■□□□□ 0.73
Irf9Q61179 Gm37935-201ENSMUST00000192012 982 ntBASIC19.61■□□□□ 0.73
Irf9Q61179 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.61■□□□□ 0.73
Irf9Q61179 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.61■□□□□ 0.73
Irf9Q61179 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Irf9Q61179 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms