Protein–RNA interactions for Protein: Q61043

Nin, Ninein, mousemouse

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NinQ61043 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NinQ61043 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.18■□□□□ 0.5
NinQ61043 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NinQ61043 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NinQ61043 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NinQ61043 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NinQ61043 Gm14722-201ENSMUST00000118943 689 ntBASIC18.17■□□□□ 0.5
NinQ61043 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NinQ61043 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NinQ61043 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NinQ61043 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NinQ61043 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NinQ61043 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.17■□□□□ 0.5
NinQ61043 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NinQ61043 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Gm14719-201ENSMUST00000121891 340 ntBASIC18.16■□□□□ 0.5
NinQ61043 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
NinQ61043 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NinQ61043 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NinQ61043 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
NinQ61043 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Mir8102-201ENSMUST00000184148 139 ntBASIC18.16■□□□□ 0.5
NinQ61043 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.16■□□□□ 0.5
NinQ61043 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
NinQ61043 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NinQ61043 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NinQ61043 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Gm6415-201ENSMUST00000118488 348 ntBASIC18.15■□□□□ 0.5
NinQ61043 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NinQ61043 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.15■□□□□ 0.5
NinQ61043 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NinQ61043 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NinQ61043 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.15■□□□□ 0.5
NinQ61043 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.15■□□□□ 0.5
NinQ61043 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NinQ61043 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
NinQ61043 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
NinQ61043 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NinQ61043 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NinQ61043 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NinQ61043 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NinQ61043 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.14■□□□□ 0.49
NinQ61043 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.14■□□□□ 0.49
NinQ61043 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.14■□□□□ 0.49
NinQ61043 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.14■□□□□ 0.49
NinQ61043 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.14■□□□□ 0.49
NinQ61043 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NinQ61043 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.14■□□□□ 0.49
NinQ61043 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NinQ61043 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms