Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Prob1-201ENSMUST00000097619 3021 ntBASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim38Q5SZ99 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Gm27742-201ENSMUST00000184667 60 ntBASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.41■□□□□ 0.22
Trim38Q5SZ99 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim38Q5SZ99 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Gm25406-201ENSMUST00000157599 105 ntBASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim38Q5SZ99 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim38Q5SZ99 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.39■□□□□ 0.22
Trim38Q5SZ99 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim38Q5SZ99 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms