Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Gm4899-201ENSMUST00000178708 719 ntBASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Gm10175-201ENSMUST00000086013 645 ntBASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-2Q5R1I4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Gm25911-201ENSMUST00000157621 56 ntBASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Gm26308-201ENSMUST00000157768 69 ntBASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Gm27300-201ENSMUST00000184085 97 ntBASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Gm27335-201ENSMUST00000184758 97 ntBASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6-2Q5R1I4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Gm18489-201ENSMUST00000172565 551 ntBASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-2Q5R1I4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms