Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav7d-4Q5R1H9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Gm2559-201ENSMUST00000201323 363 ntBASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 AV356131-201ENSMUST00000206201 750 ntBASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7d-4Q5R1H9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.08□□□□□ -0.47
Trav7d-4Q5R1H9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7d-4Q5R1H9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7d-4Q5R1H9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7d-4Q5R1H9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7d-4Q5R1H9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7d-4Q5R1H9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms