Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-3Q5R1C3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Gm10138-203ENSMUST00000206952 366 ntBASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-3Q5R1C3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms