Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Rpph1-201ENSMUST00000175096 319 ntBASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Gm5745-201ENSMUST00000183748 313 ntBASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Mir6977-201ENSMUST00000184960 64 ntBASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav8d-2Q5R1B6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Gm12008-201ENSMUST00000117791 755 ntBASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Gm24158-201ENSMUST00000175263 71 ntBASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Gm27622-201ENSMUST00000183779 60 ntBASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav8d-2Q5R1B6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-2Q5R1B6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-2Q5R1B6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-2Q5R1B6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-2Q5R1B6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-2Q5R1B6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8d-2Q5R1B6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm22065-201ENSMUST00000103753 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm22066-201ENSMUST00000103761 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm24932-201ENSMUST00000103763 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm24115-201ENSMUST00000103799 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm22190-201ENSMUST00000103827 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm22191-201ENSMUST00000103831 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm24721-201ENSMUST00000103849 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm28018-201ENSMUST00000103869 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm26399-201ENSMUST00000103937 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm25349-201ENSMUST00000177728 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm23616-201ENSMUST00000177797 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm25871-201ENSMUST00000177816 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm24752-201ENSMUST00000178240 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm24496-201ENSMUST00000178287 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm25649-201ENSMUST00000178476 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm25548-201ENSMUST00000178681 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm23147-201ENSMUST00000178841 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm26095-201ENSMUST00000179270 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm22171-201ENSMUST00000179283 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm23936-201ENSMUST00000179354 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm22619-201ENSMUST00000179516 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm25255-201ENSMUST00000179579 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm24755-201ENSMUST00000179691 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm26506-201ENSMUST00000179692 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm25086-201ENSMUST00000179931 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm23243-201ENSMUST00000180047 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm24659-201ENSMUST00000180212 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm24169-201ENSMUST00000180244 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm23689-201ENSMUST00000180354 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms