Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h1Q4VGL6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Gm14140-201ENSMUST00000119999 995 ntBASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h1Q4VGL6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Gm8000-201ENSMUST00000188378 592 ntBASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Gm45167-201ENSMUST00000208007 322 ntBASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h1Q4VGL6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Gm11594-201ENSMUST00000122313 162 ntBASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Gm12260-201ENSMUST00000122447 411 ntBASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Gm5264-201ENSMUST00000190584 848 ntBASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h1Q4VGL6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h1Q4VGL6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rc3h1Q4VGL6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms