Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx49Q4FZF3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Dancr-204ENSMUST00000132389 2347 ntBASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx49Q4FZF3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx49Q4FZF3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Gm13616-201ENSMUST00000120600 222 ntBASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx49Q4FZF3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Gm27321-201ENSMUST00000185021 205 ntBASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx49Q4FZF3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx49Q4FZF3 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.31■□□□□ 0.52
Ddx49Q4FZF3 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.31■□□□□ 0.52
Ddx49Q4FZF3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms