Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank3Q4ACU6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Gm14127-201ENSMUST00000117906 678 ntBASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Gm13015-201ENSMUST00000118674 204 ntBASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.52■□□□□ 0.72
Shank3Q4ACU6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shank3Q4ACU6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shank3Q4ACU6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shank3Q4ACU6 Gm6415-201ENSMUST00000118488 348 ntBASIC19.51■□□□□ 0.71
Shank3Q4ACU6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank3Q4ACU6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.5■□□□□ 0.71
Shank3Q4ACU6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Shank3Q4ACU6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Shank3Q4ACU6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.48■□□□□ 0.71
Shank3Q4ACU6 Mir7684-201ENSMUST00000183858 60 ntBASIC19.48■□□□□ 0.71
Shank3Q4ACU6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shank3Q4ACU6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms