Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim80Q3V061 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.39■□□□□ 0.21
Trim80Q3V061 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim80Q3V061 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
Trim80Q3V061 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim80Q3V061 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim80Q3V061 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim80Q3V061 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim80Q3V061 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.38■□□□□ 0.21
Trim80Q3V061 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Gm9103-201ENSMUST00000119371 405 ntBASIC16.38■□□□□ 0.21
Trim80Q3V061 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim80Q3V061 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim80Q3V061 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim80Q3V061 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Trim80Q3V061 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim80Q3V061 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim80Q3V061 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim80Q3V061 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim80Q3V061 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trim80Q3V061 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.36■□□□□ 0.21
Trim80Q3V061 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 App-207ENSMUST00000227737 2827 ntBASIC16.36■□□□□ 0.21
Trim80Q3V061 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Trim80Q3V061 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.36■□□□□ 0.21
Trim80Q3V061 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim80Q3V061 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.35■□□□□ 0.21
Trim80Q3V061 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim80Q3V061 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim80Q3V061 Gm27000-201ENSMUST00000182943 842 ntBASIC16.35■□□□□ 0.21
Trim80Q3V061 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim80Q3V061 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim80Q3V061 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.35■□□□□ 0.21
Trim80Q3V061 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms