Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Fam196aQ3USH1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Fam196aQ3USH1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Fam196aQ3USH1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Gm18246-201ENSMUST00000221023 728 ntBASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fam196aQ3USH1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Gm9385-201ENSMUST00000117563 472 ntBASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Gm27306-201ENSMUST00000183970 107 ntBASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Gm27989-201ENSMUST00000184721 107 ntBASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fam196aQ3USH1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Gm17837-201ENSMUST00000186435 985 ntBASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Gm18187-201ENSMUST00000196476 984 ntBASIC15.81■□□□□ 0.12
Fam196aQ3USH1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.81■□□□□ 0.12
Fam196aQ3USH1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms