Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx27Q3UHD6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.04■□□□□ 0.32
Snx27Q3UHD6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Gm4899-201ENSMUST00000178708 719 ntBASIC17.04■□□□□ 0.32
Snx27Q3UHD6 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snx27Q3UHD6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Gm14494-201ENSMUST00000118786 435 ntBASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.03■□□□□ 0.32
Snx27Q3UHD6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snx27Q3UHD6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Gm18489-201ENSMUST00000172565 551 ntBASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Gm9682-201ENSMUST00000197505 556 ntBASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Gm5867-201ENSMUST00000063197 592 ntBASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snx27Q3UHD6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Snx27Q3UHD6 Grk6-207ENSMUST00000225925 2769 ntBASIC17.02■□□□□ 0.31
Snx27Q3UHD6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Snx27Q3UHD6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Snx27Q3UHD6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Snx27Q3UHD6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Snx27Q3UHD6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Snx27Q3UHD6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms