Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gm27533-201ENSMUST00000183800 152 ntBASIC14.51□□□□□ -0.09
Spg11Q3UHA3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.51□□□□□ -0.09
Spg11Q3UHA3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gm14042-201ENSMUST00000120139 833 ntBASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gm18049-201ENSMUST00000208909 581 ntBASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Spg11Q3UHA3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.49□□□□□ -0.09
Spg11Q3UHA3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Gm12742-201ENSMUST00000117326 410 ntBASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Spg11Q3UHA3 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.49□□□□□ -0.09
Spg11Q3UHA3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.48□□□□□ -0.09
Spg11Q3UHA3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spg11Q3UHA3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spg11Q3UHA3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.47□□□□□ -0.09
Spg11Q3UHA3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Spg11Q3UHA3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.47□□□□□ -0.09
Spg11Q3UHA3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.47□□□□□ -0.09
Spg11Q3UHA3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms