Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col5a2Q3U962 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col5a2Q3U962 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Gm13823-201ENSMUST00000119930 345 ntBASIC18.64■□□□□ 0.57
Col5a2Q3U962 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col5a2Q3U962 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.63■□□□□ 0.57
Col5a2Q3U962 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col5a2Q3U962 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col5a2Q3U962 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.62■□□□□ 0.57
Col5a2Q3U962 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.62■□□□□ 0.57
Col5a2Q3U962 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col5a2Q3U962 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.61■□□□□ 0.57
Col5a2Q3U962 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Col5a2Q3U962 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col5a2Q3U962 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Gm6973-201ENSMUST00000117080 721 ntBASIC18.6■□□□□ 0.57
Col5a2Q3U962 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Gm2810-201ENSMUST00000118681 990 ntBASIC18.6■□□□□ 0.57
Col5a2Q3U962 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.6■□□□□ 0.57
Col5a2Q3U962 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Mir8102-201ENSMUST00000184148 139 ntBASIC18.6■□□□□ 0.57
Col5a2Q3U962 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms