Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Gm5161-201ENSMUST00000075243 853 ntBASIC8.35□□□□□ -1.07
Ush2AQ2QI47 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Gm17383-201ENSMUST00000078739 1041 ntBASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Gm27572-201ENSMUST00000183702 255 ntBASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ush2AQ2QI47 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm9522-201ENSMUST00000182394 926 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm10327-201ENSMUST00000105222 1002 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 AA619741-201ENSMUST00000195095 646 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm15823-201ENSMUST00000064305 670 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms