Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna5Q2MKA5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Mir449b-201ENSMUST00000104833 80 ntBASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna5Q2MKA5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Gm16198-201ENSMUST00000118766 670 ntBASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna5Q2MKA5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna5Q2MKA5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.58
Chrna5Q2MKA5 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.71■□□□□ 0.58
Chrna5Q2MKA5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna5Q2MKA5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna5Q2MKA5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna5Q2MKA5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna5Q2MKA5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna5Q2MKA5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna5Q2MKA5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms