Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Gm11543-201ENSMUST00000120758 370 ntBASIC14.1□□□□□ -0.15
Chd8Q09XV5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.1□□□□□ -0.15
Chd8Q09XV5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd8Q09XV5 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.09□□□□□ -0.15
Chd8Q09XV5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Gm27731-201ENSMUST00000185192 107 ntBASIC14.09□□□□□ -0.15
Chd8Q09XV5 Gm2272-201ENSMUST00000194903 582 ntBASIC14.09□□□□□ -0.15
Chd8Q09XV5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Gm18246-201ENSMUST00000221023 728 ntBASIC14.09□□□□□ -0.15
Chd8Q09XV5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd8Q09XV5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Chd8Q09XV5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
Chd8Q09XV5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chd8Q09XV5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.08□□□□□ -0.15
Chd8Q09XV5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Chd8Q09XV5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chd8Q09XV5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Mir7032-201ENSMUST00000185154 79 ntBASIC14.08□□□□□ -0.16
Chd8Q09XV5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.08□□□□□ -0.16
Chd8Q09XV5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Gm4857-201ENSMUST00000192718 785 ntBASIC14.08□□□□□ -0.16
Chd8Q09XV5 Gm44344-201ENSMUST00000200287 129 ntBASIC14.08□□□□□ -0.16
Chd8Q09XV5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.08□□□□□ -0.16
Chd8Q09XV5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.07□□□□□ -0.16
Chd8Q09XV5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.07□□□□□ -0.16
Chd8Q09XV5 Gm15823-201ENSMUST00000064305 670 ntBASIC14.07□□□□□ -0.16
Chd8Q09XV5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.07□□□□□ -0.16
Chd8Q09XV5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd8Q09XV5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms