Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.92□□□□□ -0.02
Nkx3-2P97503 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx3-2P97503 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Gm25406-201ENSMUST00000157599 105 ntBASIC14.91□□□□□ -0.02
Nkx3-2P97503 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx3-2P97503 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.9□□□□□ -0.02
Nkx3-2P97503 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.9□□□□□ -0.02
Nkx3-2P97503 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.9□□□□□ -0.02
Nkx3-2P97503 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.9□□□□□ -0.02
Nkx3-2P97503 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms