Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SgcbP82349 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcbP82349 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SgcbP82349 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SgcbP82349 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.08□□□□□ -0.15
SgcbP82349 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SgcbP82349 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SgcbP82349 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.08□□□□□ -0.16
SgcbP82349 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Gm12497-201ENSMUST00000138778 237 ntBASIC14.08□□□□□ -0.16
SgcbP82349 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.08□□□□□ -0.16
SgcbP82349 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.08□□□□□ -0.16
SgcbP82349 Mir8098-201ENSMUST00000184011 137 ntBASIC14.08□□□□□ -0.16
SgcbP82349 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.08□□□□□ -0.16
SgcbP82349 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.08□□□□□ -0.16
SgcbP82349 Gm5864-201ENSMUST00000202263 970 ntBASIC14.08□□□□□ -0.16
SgcbP82349 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.08□□□□□ -0.16
SgcbP82349 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.08□□□□□ -0.16
SgcbP82349 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SgcbP82349 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcbP82349 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SgcbP82349 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SgcbP82349 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
SgcbP82349 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SgcbP82349 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SgcbP82349 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm11452-201ENSMUST00000122376 690 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm8825-201ENSMUST00000182565 998 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm4518-201ENSMUST00000182638 718 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.07□□□□□ -0.16
SgcbP82349 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
SgcbP82349 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.07□□□□□ -0.16
SgcbP82349 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcbP82349 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SgcbP82349 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.06□□□□□ -0.16
SgcbP82349 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.06□□□□□ -0.16
SgcbP82349 Gm4459-201ENSMUST00000118750 468 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms