Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Irf3P70671 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf3P70671 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.12■□□□□ 0.33
Irf3P70671 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf3P70671 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Irf3P70671 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf3P70671 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf3P70671 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf3P70671 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.12■□□□□ 0.33
Irf3P70671 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.11■□□□□ 0.33
Irf3P70671 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.11■□□□□ 0.33
Irf3P70671 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Gm12260-201ENSMUST00000122447 411 ntBASIC17.11■□□□□ 0.33
Irf3P70671 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.11■□□□□ 0.33
Irf3P70671 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.11■□□□□ 0.33
Irf3P70671 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.11■□□□□ 0.33
Irf3P70671 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.11■□□□□ 0.33
Irf3P70671 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.11■□□□□ 0.33
Irf3P70671 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.11■□□□□ 0.33
Irf3P70671 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.11■□□□□ 0.33
Irf3P70671 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Irf3P70671 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Irf3P70671 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Irf3P70671 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf3P70671 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.1■□□□□ 0.33
Irf3P70671 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Irf3P70671 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Irf3P70671 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Irf3P70671 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.1■□□□□ 0.33
Irf3P70671 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.1■□□□□ 0.33
Irf3P70671 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.1■□□□□ 0.33
Irf3P70671 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.1■□□□□ 0.33
Irf3P70671 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Irf3P70671 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.1■□□□□ 0.33
Irf3P70671 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Irf3P70671 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.1■□□□□ 0.33
Irf3P70671 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf3P70671 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Irf3P70671 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Irf3P70671 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Irf3P70671 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Irf3P70671 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Gm27300-201ENSMUST00000184085 97 ntBASIC17.09■□□□□ 0.33
Irf3P70671 Gm27335-201ENSMUST00000184758 97 ntBASIC17.09■□□□□ 0.33
Irf3P70671 Gm37935-201ENSMUST00000192012 982 ntBASIC17.09■□□□□ 0.33
Irf3P70671 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.09■□□□□ 0.33
Irf3P70671 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf3P70671 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms