Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Gm15165-201ENSMUST00000118140 502 ntBASIC18.96■□□□□ 0.63
Rad50P70388 Gm6257-201ENSMUST00000163864 910 ntBASIC18.96■□□□□ 0.63
Rad50P70388 Gm44454-201ENSMUST00000198541 138 ntBASIC18.96■□□□□ 0.63
Rad50P70388 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.96■□□□□ 0.63
Rad50P70388 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rad50P70388 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rad50P70388 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rad50P70388 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.95■□□□□ 0.62
Rad50P70388 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rad50P70388 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rad50P70388 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Gm25406-201ENSMUST00000157599 105 ntBASIC18.94■□□□□ 0.62
Rad50P70388 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.94■□□□□ 0.62
Rad50P70388 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.94■□□□□ 0.62
Rad50P70388 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.94■□□□□ 0.62
Rad50P70388 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rad50P70388 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.94■□□□□ 0.62
Rad50P70388 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rad50P70388 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rad50P70388 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.93■□□□□ 0.62
Rad50P70388 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.93■□□□□ 0.62
Rad50P70388 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rad50P70388 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.93■□□□□ 0.62
Rad50P70388 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.93■□□□□ 0.62
Rad50P70388 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.93■□□□□ 0.62
Rad50P70388 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rad50P70388 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
Rad50P70388 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.93■□□□□ 0.62
Rad50P70388 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rad50P70388 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.92■□□□□ 0.62
Rad50P70388 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.92■□□□□ 0.62
Rad50P70388 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rad50P70388 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rad50P70388 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rad50P70388 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.91■□□□□ 0.62
Rad50P70388 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rad50P70388 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rad50P70388 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rad50P70388 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rad50P70388 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Rad50P70388 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rad50P70388 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rad50P70388 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.91■□□□□ 0.62
Rad50P70388 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rad50P70388 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rad50P70388 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms