Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.17□□□□□ -0.3
Pdlim4P70271 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.17□□□□□ -0.3
Pdlim4P70271 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.17□□□□□ -0.3
Pdlim4P70271 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.17□□□□□ -0.3
Pdlim4P70271 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim4P70271 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.17□□□□□ -0.3
Pdlim4P70271 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.17□□□□□ -0.3
Pdlim4P70271 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.17□□□□□ -0.3
Pdlim4P70271 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim4P70271 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim4P70271 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.16□□□□□ -0.3
Pdlim4P70271 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.16□□□□□ -0.3
Pdlim4P70271 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pdlim4P70271 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Gm9103-201ENSMUST00000119371 405 ntBASIC13.16□□□□□ -0.3
Pdlim4P70271 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pdlim4P70271 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Gm10819-201ENSMUST00000099988 561 ntBASIC13.16□□□□□ -0.3
Pdlim4P70271 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.16□□□□□ -0.3
Pdlim4P70271 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pdlim4P70271 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.16□□□□□ -0.3
Pdlim4P70271 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.16□□□□□ -0.3
Pdlim4P70271 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim4P70271 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim4P70271 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim4P70271 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Pdlim4P70271 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.15□□□□□ -0.31
Pdlim4P70271 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim4P70271 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim4P70271 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim4P70271 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim4P70271 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pdlim4P70271 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.14□□□□□ -0.31
Pdlim4P70271 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.14□□□□□ -0.31
Pdlim4P70271 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.14□□□□□ -0.31
Pdlim4P70271 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.14□□□□□ -0.31
Pdlim4P70271 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms