Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vamp3P63024 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vamp3P63024 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vamp3P63024 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vamp3P63024 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.18□□□□□ -0.46
Vamp3P63024 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vamp3P63024 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.18□□□□□ -0.46
Vamp3P63024 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.18□□□□□ -0.46
Vamp3P63024 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.18□□□□□ -0.46
Vamp3P63024 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.18□□□□□ -0.46
Vamp3P63024 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vamp3P63024 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Vamp3P63024 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.17□□□□□ -0.46
Vamp3P63024 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.17□□□□□ -0.46
Vamp3P63024 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vamp3P63024 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vamp3P63024 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Vamp3P63024 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.17□□□□□ -0.46
Vamp3P63024 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vamp3P63024 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vamp3P63024 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vamp3P63024 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Vamp3P63024 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vamp3P63024 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vamp3P63024 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.16□□□□□ -0.46
Vamp3P63024 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vamp3P63024 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Vamp3P63024 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Gm13238-201ENSMUST00000117655 780 ntBASIC12.16□□□□□ -0.46
Vamp3P63024 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vamp3P63024 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vamp3P63024 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.16□□□□□ -0.46
Vamp3P63024 Gm43060-201ENSMUST00000200621 289 ntBASIC12.16□□□□□ -0.46
Vamp3P63024 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vamp3P63024 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vamp3P63024 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vamp3P63024 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms