Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubgcp3P58854 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.18■□□□□ 0.18
Tubgcp3P58854 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tubgcp3P58854 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.17■□□□□ 0.18
Tubgcp3P58854 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubgcp3P58854 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tubgcp3P58854 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.16■□□□□ 0.18
Tubgcp3P58854 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tubgcp3P58854 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tubgcp3P58854 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Mir6404-201ENSMUST00000183699 94 ntBASIC16.15■□□□□ 0.18
Tubgcp3P58854 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 App-207ENSMUST00000227737 2827 ntBASIC16.15■□□□□ 0.18
Tubgcp3P58854 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubgcp3P58854 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Tubgcp3P58854 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.14■□□□□ 0.17
Tubgcp3P58854 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.14■□□□□ 0.17
Tubgcp3P58854 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.14■□□□□ 0.17
Tubgcp3P58854 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubgcp3P58854 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Tubgcp3P58854 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubgcp3P58854 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubgcp3P58854 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubgcp3P58854 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubgcp3P58854 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubgcp3P58854 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubgcp3P58854 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms