Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.59■□□□□ 0.25
NcanP55066 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.59■□□□□ 0.25
NcanP55066 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.59■□□□□ 0.25
NcanP55066 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.59■□□□□ 0.25
NcanP55066 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.59■□□□□ 0.25
NcanP55066 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NcanP55066 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NcanP55066 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NcanP55066 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
NcanP55066 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NcanP55066 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NcanP55066 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NcanP55066 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NcanP55066 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.58■□□□□ 0.24
NcanP55066 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NcanP55066 Gm16215-201ENSMUST00000161990 637 ntBASIC16.58■□□□□ 0.24
NcanP55066 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NcanP55066 Mir7684-201ENSMUST00000183858 60 ntBASIC16.58■□□□□ 0.24
NcanP55066 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NcanP55066 Gm44855-201ENSMUST00000205725 362 ntBASIC16.58■□□□□ 0.24
NcanP55066 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.58■□□□□ 0.24
NcanP55066 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NcanP55066 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NcanP55066 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NcanP55066 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NcanP55066 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NcanP55066 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.58■□□□□ 0.24
NcanP55066 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NcanP55066 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NcanP55066 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NcanP55066 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.57■□□□□ 0.24
NcanP55066 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Syt7-205ENSMUST00000224135 1557 ntBASIC16.57■□□□□ 0.24
NcanP55066 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NcanP55066 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Gm13453-201ENSMUST00000118708 357 ntBASIC16.57■□□□□ 0.24
NcanP55066 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.57■□□□□ 0.24
NcanP55066 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.57■□□□□ 0.24
NcanP55066 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.57■□□□□ 0.24
NcanP55066 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NcanP55066 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NcanP55066 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.56■□□□□ 0.24
NcanP55066 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NcanP55066 Gm11478-201ENSMUST00000117851 599 ntBASIC16.56■□□□□ 0.24
NcanP55066 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.56■□□□□ 0.24
NcanP55066 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NcanP55066 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NcanP55066 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.56■□□□□ 0.24
NcanP55066 Gm10154-201ENSMUST00000084445 354 ntBASIC16.56■□□□□ 0.24
NcanP55066 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.56■□□□□ 0.24
NcanP55066 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NcanP55066 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
NcanP55066 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NcanP55066 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NcanP55066 Gm6973-201ENSMUST00000117080 721 ntBASIC16.55■□□□□ 0.24
NcanP55066 Gm13829-201ENSMUST00000119600 138 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms