Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm27646-201ENSMUST00000183989 110 ntBASIC16.81■□□□□ 0.28
NrlP54846 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
NrlP54846 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Gm10175-201ENSMUST00000086013 645 ntBASIC16.81■□□□□ 0.28
NrlP54846 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NrlP54846 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NrlP54846 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NrlP54846 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.8■□□□□ 0.28
NrlP54846 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NrlP54846 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.8■□□□□ 0.28
NrlP54846 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm25911-201ENSMUST00000157621 56 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.8■□□□□ 0.28
NrlP54846 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm8825-201ENSMUST00000182565 998 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm4518-201ENSMUST00000182638 718 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.8■□□□□ 0.28
NrlP54846 Mir8117-201ENSMUST00000184773 107 ntBASIC16.8■□□□□ 0.28
NrlP54846 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.8■□□□□ 0.28
NrlP54846 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.8■□□□□ 0.28
NrlP54846 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NrlP54846 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.8■□□□□ 0.28
NrlP54846 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.8■□□□□ 0.28
NrlP54846 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.8■□□□□ 0.28
NrlP54846 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.8■□□□□ 0.28
NrlP54846 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.8■□□□□ 0.28
NrlP54846 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
NrlP54846 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NrlP54846 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NrlP54846 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NrlP54846 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NrlP54846 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NrlP54846 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NrlP54846 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NrlP54846 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.79■□□□□ 0.28
NrlP54846 Mir3113-201ENSMUST00000175478 76 ntBASIC16.79■□□□□ 0.28
NrlP54846 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.79■□□□□ 0.28
NrlP54846 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NrlP54846 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.79■□□□□ 0.28
NrlP54846 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NrlP54846 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
NrlP54846 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NrlP54846 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NrlP54846 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NrlP54846 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NrlP54846 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms