Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-1P50220 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkx2-1P50220 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.14□□□□□ -0.31
Nkx2-1P50220 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.14□□□□□ -0.31
Nkx2-1P50220 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Gm27011-201ENSMUST00000182352 972 ntBASIC13.14□□□□□ -0.31
Nkx2-1P50220 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Timm23-208ENSMUST00000226683 750 ntBASIC13.14□□□□□ -0.31
Nkx2-1P50220 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-1P50220 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.13□□□□□ -0.31
Nkx2-1P50220 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Gm13186-201ENSMUST00000118031 316 ntBASIC13.13□□□□□ -0.31
Nkx2-1P50220 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.13□□□□□ -0.31
Nkx2-1P50220 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-1P50220 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.12□□□□□ -0.31
Nkx2-1P50220 Odf3b-204ENSMUST00000227834 930 ntBASIC13.12□□□□□ -0.31
Nkx2-1P50220 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms