Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Brca1P48754 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.63■□□□□ 0.41
Brca1P48754 Gm27430-201ENSMUST00000184585 107 ntBASIC17.63■□□□□ 0.41
Brca1P48754 Gm44333-201ENSMUST00000197168 107 ntBASIC17.63■□□□□ 0.41
Brca1P48754 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Brca1P48754 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.63■□□□□ 0.41
Brca1P48754 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Gm24158-201ENSMUST00000175263 71 ntBASIC17.63■□□□□ 0.41
Brca1P48754 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Brca1P48754 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Brca1P48754 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Brca1P48754 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.63■□□□□ 0.41
Brca1P48754 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Brca1P48754 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.62■□□□□ 0.41
Brca1P48754 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.62■□□□□ 0.41
Brca1P48754 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.62■□□□□ 0.41
Brca1P48754 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Brca1P48754 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.62■□□□□ 0.41
Brca1P48754 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Brca1P48754 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.61■□□□□ 0.41
Brca1P48754 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.61■□□□□ 0.41
Brca1P48754 Gm27618-201ENSMUST00000183671 60 ntBASIC17.61■□□□□ 0.41
Brca1P48754 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.61■□□□□ 0.41
Brca1P48754 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.61■□□□□ 0.41
Brca1P48754 Gm10154-201ENSMUST00000084445 354 ntBASIC17.61■□□□□ 0.41
Brca1P48754 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.61■□□□□ 0.41
Brca1P48754 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.61■□□□□ 0.41
Brca1P48754 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Brca1P48754 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Brca1P48754 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Brca1P48754 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Brca1P48754 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.61■□□□□ 0.41
Brca1P48754 Gm7730-201ENSMUST00000212486 454 ntBASIC17.61■□□□□ 0.41
Brca1P48754 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.61■□□□□ 0.41
Brca1P48754 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.61■□□□□ 0.41
Brca1P48754 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.6■□□□□ 0.41
Brca1P48754 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Grk6-207ENSMUST00000225925 2769 ntBASIC17.6■□□□□ 0.41
Brca1P48754 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.6■□□□□ 0.41
Brca1P48754 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Brca1P48754 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Brca1P48754 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brca1P48754 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.59■□□□□ 0.41
Brca1P48754 Gm14127-201ENSMUST00000117906 678 ntBASIC17.59■□□□□ 0.41
Brca1P48754 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.59■□□□□ 0.41
Brca1P48754 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.59■□□□□ 0.41
Brca1P48754 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Brca1P48754 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brca1P48754 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Brca1P48754 Gm18057-201ENSMUST00000208220 503 ntBASIC17.58■□□□□ 0.41
Brca1P48754 Gm5779-201ENSMUST00000218467 910 ntBASIC17.58■□□□□ 0.41
Brca1P48754 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms