Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.35□□□□□ -0.75
Xcl1P47993 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.34□□□□□ -0.75
Xcl1P47993 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC10.34□□□□□ -0.75
Xcl1P47993 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Xcl1P47993 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.34□□□□□ -0.75
Xcl1P47993 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Xcl1P47993 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.34□□□□□ -0.75
Xcl1P47993 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Xcl1P47993 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.33□□□□□ -0.76
Xcl1P47993 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.33□□□□□ -0.76
Xcl1P47993 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Gm37820-201ENSMUST00000194021 2147 ntBASIC10.33□□□□□ -0.76
Xcl1P47993 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Gm7417-201ENSMUST00000192950 473 ntBASIC10.33□□□□□ -0.76
Xcl1P47993 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC10.33□□□□□ -0.76
Xcl1P47993 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Gm5576-201ENSMUST00000075809 1236 ntBASIC10.33□□□□□ -0.76
Xcl1P47993 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Xcl1P47993 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC10.33□□□□□ -0.76
Xcl1P47993 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Xcl1P47993 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Xcl1P47993 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Xcl1P47993 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Xcl1P47993 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Xcl1P47993 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC10.33□□□□□ -0.76
Xcl1P47993 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Xcl1P47993 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms