Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm44346-201ENSMUST00000198851 141 ntBASIC15.12■□□□□ 0.01
Sox18P43680 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.12■□□□□ 0.01
Sox18P43680 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sox18P43680 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sox18P43680 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sox18P43680 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Sox18P43680 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox18P43680 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sox18P43680 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
Sox18P43680 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.11■□□□□ 0.01
Sox18P43680 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.11■□□□□ 0.01
Sox18P43680 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox18P43680 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.11■□□□□ 0.01
Sox18P43680 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.11■□□□□ 0.01
Sox18P43680 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox18P43680 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Sox18P43680 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox18P43680 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox18P43680 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox18P43680 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sox18P43680 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox18P43680 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sox18P43680 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Sox18P43680 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.1■□□□□ 0.01
Sox18P43680 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.1■□□□□ 0.01
Sox18P43680 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Gm17968-201ENSMUST00000194902 784 ntBASIC15.1■□□□□ 0.01
Sox18P43680 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sox18P43680 Gm45612-201ENSMUST00000211320 160 ntBASIC15.1■□□□□ 0.01
Sox18P43680 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox18P43680 Gm18622-201ENSMUST00000219361 595 ntBASIC15.1■□□□□ 0.01
Sox18P43680 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.1■□□□□ 0.01
Sox18P43680 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.1■□□□□ 0.01
Sox18P43680 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Sox18P43680 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox18P43680 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.09■□□□□ 0.01
Sox18P43680 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Gm11424-201ENSMUST00000121929 829 ntBASIC15.09■□□□□ 0.01
Sox18P43680 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Sox18P43680 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.09■□□□□ 0.01
Sox18P43680 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.09■□□□□ 0.01
Sox18P43680 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.09■□□□□ 0.01
Sox18P43680 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sox18P43680 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox18P43680 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms