Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Abca1P41233 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
Abca1P41233 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Abca1P41233 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Abca1P41233 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Abca1P41233 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Abca1P41233 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.14□□□□□ -0.31
Abca1P41233 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Abca1P41233 Gm15590-201ENSMUST00000078419 552 ntBASIC13.14□□□□□ -0.31
Abca1P41233 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Abca1P41233 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.14□□□□□ -0.31
Abca1P41233 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.14□□□□□ -0.31
Abca1P41233 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.14□□□□□ -0.31
Abca1P41233 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Abca1P41233 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Abca1P41233 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Abca1P41233 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abca1P41233 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Abca1P41233 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.14□□□□□ -0.31
Abca1P41233 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.13□□□□□ -0.31
Abca1P41233 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.13□□□□□ -0.31
Abca1P41233 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.13□□□□□ -0.31
Abca1P41233 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Abca1P41233 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.13□□□□□ -0.31
Abca1P41233 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.13□□□□□ -0.31
Abca1P41233 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.13□□□□□ -0.31
Abca1P41233 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.13□□□□□ -0.31
Abca1P41233 Gm10576-201ENSMUST00000191927 825 ntBASIC13.13□□□□□ -0.31
Abca1P41233 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.13□□□□□ -0.31
Abca1P41233 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.13□□□□□ -0.31
Abca1P41233 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abca1P41233 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Abca1P41233 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.12□□□□□ -0.31
Abca1P41233 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Abca1P41233 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Abca1P41233 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.12□□□□□ -0.31
Abca1P41233 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Abca1P41233 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms