Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cxcl12P40224 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.26■□□□□ 0.19
Cxcl12P40224 Gm9385-201ENSMUST00000117563 472 ntBASIC16.26■□□□□ 0.19
Cxcl12P40224 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.26■□□□□ 0.19
Cxcl12P40224 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.26■□□□□ 0.19
Cxcl12P40224 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.26■□□□□ 0.19
Cxcl12P40224 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.26■□□□□ 0.19
Cxcl12P40224 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cxcl12P40224 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cxcl12P40224 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl12P40224 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Gm12008-201ENSMUST00000117791 755 ntBASIC16.25■□□□□ 0.19
Cxcl12P40224 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.25■□□□□ 0.19
Cxcl12P40224 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.25■□□□□ 0.19
Cxcl12P40224 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.25■□□□□ 0.19
Cxcl12P40224 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.25■□□□□ 0.19
Cxcl12P40224 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cxcl12P40224 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl12P40224 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cxcl12P40224 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.24■□□□□ 0.19
Cxcl12P40224 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Cxcl12P40224 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Cxcl12P40224 Gm14127-201ENSMUST00000117906 678 ntBASIC16.24■□□□□ 0.19
Cxcl12P40224 Gm12151-201ENSMUST00000121374 290 ntBASIC16.24■□□□□ 0.19
Cxcl12P40224 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.24■□□□□ 0.19
Cxcl12P40224 Gm6257-201ENSMUST00000163864 910 ntBASIC16.24■□□□□ 0.19
Cxcl12P40224 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.24■□□□□ 0.19
Cxcl12P40224 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Gm5779-201ENSMUST00000218467 910 ntBASIC16.24■□□□□ 0.19
Cxcl12P40224 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.24■□□□□ 0.19
Cxcl12P40224 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.24■□□□□ 0.19
Cxcl12P40224 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl12P40224 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Cxcl12P40224 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Grk6-207ENSMUST00000225925 2769 ntBASIC16.23■□□□□ 0.19
Cxcl12P40224 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Cxcl12P40224 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cxcl12P40224 Gm25287-201ENSMUST00000103846 110 ntBASIC16.23■□□□□ 0.19
Cxcl12P40224 Gm22918-201ENSMUST00000103855 110 ntBASIC16.23■□□□□ 0.19
Cxcl12P40224 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.23■□□□□ 0.19
Cxcl12P40224 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.23■□□□□ 0.19
Cxcl12P40224 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.23■□□□□ 0.19
Cxcl12P40224 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Cxcl12P40224 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.23■□□□□ 0.19
Cxcl12P40224 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl12P40224 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cxcl12P40224 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms