Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Sox5P35710 Gm11355-201ENSMUST00000121120 306 ntBASIC17.29■□□□□ 0.36
Sox5P35710 Mir6404-201ENSMUST00000183699 94 ntBASIC17.29■□□□□ 0.36
Sox5P35710 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.29■□□□□ 0.36
Sox5P35710 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Sox5P35710 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sox5P35710 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sox5P35710 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sox5P35710 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.28■□□□□ 0.36
Sox5P35710 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sox5P35710 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Sox5P35710 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sox5P35710 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sox5P35710 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.28■□□□□ 0.36
Sox5P35710 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sox5P35710 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox5P35710 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Sox5P35710 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.27■□□□□ 0.36
Sox5P35710 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.27■□□□□ 0.36
Sox5P35710 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Sox5P35710 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.27■□□□□ 0.36
Sox5P35710 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox5P35710 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sox5P35710 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sox5P35710 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sox5P35710 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox5P35710 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.27■□□□□ 0.35
Sox5P35710 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.27■□□□□ 0.35
Sox5P35710 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox5P35710 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox5P35710 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox5P35710 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.27■□□□□ 0.35
Sox5P35710 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sox5P35710 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sox5P35710 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.26■□□□□ 0.35
Sox5P35710 Gm22697-201ENSMUST00000175194 63 ntBASIC17.26■□□□□ 0.35
Sox5P35710 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox5P35710 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.26■□□□□ 0.35
Sox5P35710 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox5P35710 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox5P35710 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms