Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.69□□□□□ -0.06
Nedd8P29595 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Gm10517-202ENSMUST00000192970 758 ntBASIC14.69□□□□□ -0.06
Nedd8P29595 Gm10033-202ENSMUST00000211874 928 ntBASIC14.69□□□□□ -0.06
Nedd8P29595 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nedd8P29595 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.69□□□□□ -0.06
Nedd8P29595 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nedd8P29595 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nedd8P29595 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nedd8P29595 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Nedd8P29595 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Nedd8P29595 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nedd8P29595 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.68□□□□□ -0.06
Nedd8P29595 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nedd8P29595 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Gm7290-201ENSMUST00000104990 617 ntBASIC14.68□□□□□ -0.06
Nedd8P29595 Gm12918-201ENSMUST00000120234 636 ntBASIC14.68□□□□□ -0.06
Nedd8P29595 Gm15710-201ENSMUST00000121821 636 ntBASIC14.68□□□□□ -0.06
Nedd8P29595 Gm26524-201ENSMUST00000192339 390 ntBASIC14.68□□□□□ -0.06
Nedd8P29595 Gm5075-201ENSMUST00000196916 622 ntBASIC14.68□□□□□ -0.06
Nedd8P29595 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.68□□□□□ -0.06
Nedd8P29595 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.68□□□□□ -0.06
Nedd8P29595 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.68□□□□□ -0.06
Nedd8P29595 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.68□□□□□ -0.06
Nedd8P29595 Gm10493-201ENSMUST00000097270 612 ntBASIC14.68□□□□□ -0.06
Nedd8P29595 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.68□□□□□ -0.06
Nedd8P29595 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Nedd8P29595 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nedd8P29595 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nedd8P29595 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Nedd8P29595 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nedd8P29595 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.67□□□□□ -0.06
Nedd8P29595 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.67□□□□□ -0.06
Nedd8P29595 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.67□□□□□ -0.06
Nedd8P29595 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.67□□□□□ -0.06
Nedd8P29595 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Nedd8P29595 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Nedd8P29595 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nedd8P29595 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nedd8P29595 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.66□□□□□ -0.06
Nedd8P29595 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Nedd8P29595 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.66□□□□□ -0.06
Nedd8P29595 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.66□□□□□ -0.06
Nedd8P29595 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms