Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.31□□□□□ -0.12
Cd40P27512 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40P27512 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cd40P27512 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cd40P27512 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.3□□□□□ -0.12
Cd40P27512 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.3□□□□□ -0.12
Cd40P27512 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cd40P27512 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.3□□□□□ -0.12
Cd40P27512 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.3□□□□□ -0.12
Cd40P27512 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.3□□□□□ -0.12
Cd40P27512 Gm8655-201ENSMUST00000221159 852 ntBASIC14.3□□□□□ -0.12
Cd40P27512 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.3□□□□□ -0.12
Cd40P27512 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd40P27512 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd40P27512 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cd40P27512 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.29□□□□□ -0.12
Cd40P27512 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.29□□□□□ -0.12
Cd40P27512 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cd40P27512 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cd40P27512 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cd40P27512 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd40P27512 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.28□□□□□ -0.12
Cd40P27512 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.28□□□□□ -0.12
Cd40P27512 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.28□□□□□ -0.12
Cd40P27512 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.28□□□□□ -0.12
Cd40P27512 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Gm18622-201ENSMUST00000219361 595 ntBASIC14.28□□□□□ -0.12
Cd40P27512 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.28□□□□□ -0.12
Cd40P27512 Birc2-201ENSMUST00000054878 378 ntBASIC14.28□□□□□ -0.12
Cd40P27512 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cd40P27512 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd40P27512 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40P27512 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40P27512 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Cd40P27512 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40P27512 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40P27512 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40P27512 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40P27512 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40P27512 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd40P27512 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cd40P27512 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms