Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.23■□□□□ 0.19
Nfkb1P25799 Psmb5-202ENSMUST00000227257 622 ntBASIC16.23■□□□□ 0.19
Nfkb1P25799 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.23■□□□□ 0.19
Nfkb1P25799 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nfkb1P25799 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nfkb1P25799 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nfkb1P25799 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Nfkb1P25799 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Nfkb1P25799 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nfkb1P25799 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.22■□□□□ 0.19
Nfkb1P25799 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nfkb1P25799 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Gm27628-201ENSMUST00000184911 107 ntBASIC16.22■□□□□ 0.19
Nfkb1P25799 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nfkb1P25799 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.22■□□□□ 0.19
Nfkb1P25799 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nfkb1P25799 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nfkb1P25799 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nfkb1P25799 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Nfkb1P25799 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.21■□□□□ 0.19
Nfkb1P25799 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.21■□□□□ 0.19
Nfkb1P25799 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.21■□□□□ 0.19
Nfkb1P25799 Gm8000-201ENSMUST00000188378 592 ntBASIC16.21■□□□□ 0.19
Nfkb1P25799 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.21■□□□□ 0.19
Nfkb1P25799 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.21■□□□□ 0.19
Nfkb1P25799 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.21■□□□□ 0.19
Nfkb1P25799 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nfkb1P25799 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Nfkb1P25799 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nfkb1P25799 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Nfkb1P25799 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nfkb1P25799 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Nfkb1P25799 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.2■□□□□ 0.18
Nfkb1P25799 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nfkb1P25799 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nfkb1P25799 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.2■□□□□ 0.18
Nfkb1P25799 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Gm11779-201ENSMUST00000118541 368 ntBASIC16.2■□□□□ 0.18
Nfkb1P25799 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.2■□□□□ 0.18
Nfkb1P25799 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Nfkb1P25799 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.2■□□□□ 0.18
Nfkb1P25799 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.2■□□□□ 0.18
Nfkb1P25799 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.2■□□□□ 0.18
Nfkb1P25799 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Gm5867-201ENSMUST00000063197 592 ntBASIC16.2■□□□□ 0.18
Nfkb1P25799 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.2■□□□□ 0.18
Nfkb1P25799 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nfkb1P25799 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nfkb1P25799 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nfkb1P25799 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms