Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Irf8P23611 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.05■□□□□ 0.32
Irf8P23611 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf8P23611 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Irf8P23611 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.05■□□□□ 0.32
Irf8P23611 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf8P23611 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Irf8P23611 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf8P23611 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf8P23611 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf8P23611 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Irf8P23611 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.04■□□□□ 0.32
Irf8P23611 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Irf8P23611 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Irf8P23611 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Irf8P23611 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Irf8P23611 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.04■□□□□ 0.32
Irf8P23611 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf8P23611 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf8P23611 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.04■□□□□ 0.32
Irf8P23611 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Irf8P23611 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.04■□□□□ 0.32
Irf8P23611 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf8P23611 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf8P23611 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.04■□□□□ 0.32
Irf8P23611 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.04■□□□□ 0.32
Irf8P23611 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Irf8P23611 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.03■□□□□ 0.32
Irf8P23611 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.03■□□□□ 0.32
Irf8P23611 Gm4535-201ENSMUST00000182274 558 ntBASIC17.03■□□□□ 0.32
Irf8P23611 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Gm10355-201ENSMUST00000097146 517 ntBASIC17.03■□□□□ 0.32
Irf8P23611 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Irf8P23611 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Irf8P23611 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf8P23611 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.03■□□□□ 0.32
Irf8P23611 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Irf8P23611 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Irf8P23611 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.02■□□□□ 0.32
Irf8P23611 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Irf8P23611 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf8P23611 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Irf8P23611 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.02■□□□□ 0.32
Irf8P23611 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf8P23611 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.02■□□□□ 0.32
Irf8P23611 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.02■□□□□ 0.32
Irf8P23611 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf8P23611 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf8P23611 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.02■□□□□ 0.32
Irf8P23611 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf8P23611 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Irf8P23611 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf8P23611 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf8P23611 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Irf8P23611 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.01■□□□□ 0.31
Irf8P23611 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Irf8P23611 Gm44357-201ENSMUST00000195897 142 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm19658-201ENSMUST00000196231 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44367-201ENSMUST00000196836 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44350-201ENSMUST00000197197 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44390-201ENSMUST00000197533 144 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44313-201ENSMUST00000198018 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44486-201ENSMUST00000198508 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44314-201ENSMUST00000199263 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44394-201ENSMUST00000199558 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44484-201ENSMUST00000199873 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44466-201ENSMUST00000200264 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Gm44359-201ENSMUST00000200671 138 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.01■□□□□ 0.31
Irf8P23611 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms