Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Hmga1P17095 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.13■□□□□ 0.17
Hmga1P17095 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hmga1P17095 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hmga1P17095 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmga1P17095 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hmga1P17095 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Hmga1P17095 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.12■□□□□ 0.17
Hmga1P17095 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.12■□□□□ 0.17
Hmga1P17095 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.12■□□□□ 0.17
Hmga1P17095 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.12■□□□□ 0.17
Hmga1P17095 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Hmga1P17095 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hmga1P17095 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.12■□□□□ 0.17
Hmga1P17095 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.12■□□□□ 0.17
Hmga1P17095 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmga1P17095 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.11■□□□□ 0.17
Hmga1P17095 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hmga1P17095 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.11■□□□□ 0.17
Hmga1P17095 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.11■□□□□ 0.17
Hmga1P17095 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Hmga1P17095 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.11■□□□□ 0.17
Hmga1P17095 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hmga1P17095 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.11■□□□□ 0.17
Hmga1P17095 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.11■□□□□ 0.17
Hmga1P17095 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Gm10175-201ENSMUST00000086013 645 ntBASIC16.11■□□□□ 0.17
Hmga1P17095 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.11■□□□□ 0.17
Hmga1P17095 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hmga1P17095 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.11■□□□□ 0.17
Hmga1P17095 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.11■□□□□ 0.17
Hmga1P17095 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmga1P17095 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.1■□□□□ 0.17
Hmga1P17095 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.1■□□□□ 0.17
Hmga1P17095 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.1■□□□□ 0.17
Hmga1P17095 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Hmga1P17095 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.1■□□□□ 0.17
Hmga1P17095 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.1■□□□□ 0.17
Hmga1P17095 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.1■□□□□ 0.17
Hmga1P17095 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Hmga1P17095 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.1■□□□□ 0.17
Hmga1P17095 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.1■□□□□ 0.17
Hmga1P17095 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmga1P17095 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms