Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Msx1P13297 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Msx1P13297 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.99□□□□□ -0.01
Msx1P13297 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Msx1P13297 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Msx1P13297 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.99□□□□□ -0.01
Msx1P13297 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Msx1P13297 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Msx1P13297 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Msx1P13297 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msx1P13297 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Msx1P13297 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.98□□□□□ -0.01
Msx1P13297 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Msx1P13297 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.98□□□□□ -0.01
Msx1P13297 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.98□□□□□ -0.01
Msx1P13297 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Msx1P13297 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Msx1P13297 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.98□□□□□ -0.01
Msx1P13297 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.98□□□□□ -0.01
Msx1P13297 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx1P13297 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Msx1P13297 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 Gm12260-201ENSMUST00000122447 411 ntBASIC14.97□□□□□ -0.01
Msx1P13297 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.97□□□□□ -0.01
Msx1P13297 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.97□□□□□ -0.01
Msx1P13297 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Msx1P13297 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx1P13297 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx1P13297 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx1P13297 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx1P13297 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx1P13297 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx1P13297 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx1P13297 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Msx1P13297 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Msx1P13297 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx1P13297 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx1P13297 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Msx1P13297 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Msx1P13297 Gm7230-201ENSMUST00000173026 815 ntBASIC14.96□□□□□ -0.01
Msx1P13297 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms