Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.41■□□□□ 0.86
Hoxc9P09633 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Hoxc9P09633 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.41■□□□□ 0.86
Hoxc9P09633 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Hoxc9P09633 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.41■□□□□ 0.86
Hoxc9P09633 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Hoxc9P09633 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.41■□□□□ 0.86
Hoxc9P09633 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.4■□□□□ 0.86
Hoxc9P09633 Gm13616-201ENSMUST00000120600 222 ntBASIC20.4■□□□□ 0.86
Hoxc9P09633 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.4■□□□□ 0.86
Hoxc9P09633 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.4■□□□□ 0.86
Hoxc9P09633 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Hoxc9P09633 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc9P09633 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Hoxc9P09633 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
Hoxc9P09633 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hoxc9P09633 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.39■□□□□ 0.85
Hoxc9P09633 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.39■□□□□ 0.85
Hoxc9P09633 Gm8318-201ENSMUST00000182954 872 ntBASIC20.39■□□□□ 0.85
Hoxc9P09633 Mir6956-201ENSMUST00000183598 62 ntBASIC20.39■□□□□ 0.85
Hoxc9P09633 Gm7063-201ENSMUST00000186840 981 ntBASIC20.39■□□□□ 0.85
Hoxc9P09633 Gm44872-201ENSMUST00000207864 420 ntBASIC20.39■□□□□ 0.85
Hoxc9P09633 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.39■□□□□ 0.85
Hoxc9P09633 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.39■□□□□ 0.85
Hoxc9P09633 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hoxc9P09633 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Hoxc9P09633 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc9P09633 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.38■□□□□ 0.85
Hoxc9P09633 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.38■□□□□ 0.85
Hoxc9P09633 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.38■□□□□ 0.85
Hoxc9P09633 Rpph1-201ENSMUST00000175096 319 ntBASIC20.38■□□□□ 0.85
Hoxc9P09633 Gm5312-201ENSMUST00000203728 547 ntBASIC20.38■□□□□ 0.85
Hoxc9P09633 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.38■□□□□ 0.85
Hoxc9P09633 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.38■□□□□ 0.85
Hoxc9P09633 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
Hoxc9P09633 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hoxc9P09633 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc9P09633 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxc9P09633 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.37■□□□□ 0.85
Hoxc9P09633 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hoxc9P09633 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.37■□□□□ 0.85
Hoxc9P09633 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxc9P09633 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Gm9385-201ENSMUST00000117563 472 ntBASIC20.37■□□□□ 0.85
Hoxc9P09633 Gm12008-201ENSMUST00000117791 755 ntBASIC20.37■□□□□ 0.85
Hoxc9P09633 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.37■□□□□ 0.85
Hoxc9P09633 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.37■□□□□ 0.85
Hoxc9P09633 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxc9P09633 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Hoxc9P09633 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms