Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Col4a1P02463 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col4a1P02463 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.29■□□□□ 0.68
Col4a1P02463 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.29■□□□□ 0.68
Col4a1P02463 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Col4a1P02463 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Col4a1P02463 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Col4a1P02463 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.28■□□□□ 0.68
Col4a1P02463 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.28■□□□□ 0.68
Col4a1P02463 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a1P02463 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col4a1P02463 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.27■□□□□ 0.68
Col4a1P02463 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.27■□□□□ 0.68
Col4a1P02463 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.27■□□□□ 0.68
Col4a1P02463 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col4a1P02463 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.27■□□□□ 0.68
Col4a1P02463 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a1P02463 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.27■□□□□ 0.68
Col4a1P02463 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col4a1P02463 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Col4a1P02463 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.27■□□□□ 0.67
Col4a1P02463 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.27■□□□□ 0.67
Col4a1P02463 Gm20949-201ENSMUST00000206478 952 ntBASIC19.27■□□□□ 0.67
Col4a1P02463 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a1P02463 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col4a1P02463 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a1P02463 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col4a1P02463 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.26■□□□□ 0.67
Col4a1P02463 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a1P02463 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a1P02463 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.26■□□□□ 0.67
Col4a1P02463 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a1P02463 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a1P02463 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a1P02463 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.26■□□□□ 0.67
Col4a1P02463 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.26■□□□□ 0.67
Col4a1P02463 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Col4a1P02463 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Gm38294-201ENSMUST00000192831 381 ntBASIC19.25■□□□□ 0.67
Col4a1P02463 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.25■□□□□ 0.67
Col4a1P02463 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Col4a1P02463 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a1P02463 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.24■□□□□ 0.67
Col4a1P02463 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Col4a1P02463 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Col4a1P02463 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Col4a1P02463 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.24■□□□□ 0.67
Col4a1P02463 Gm44872-201ENSMUST00000207864 420 ntBASIC19.24■□□□□ 0.67
Col4a1P02463 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.24■□□□□ 0.67
Col4a1P02463 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.24■□□□□ 0.67
Col4a1P02463 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Col4a1P02463 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms