Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.59□□□□□ -0.55
TcraP01849 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TcraP01849 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TcraP01849 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
TcraP01849 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
TcraP01849 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
TcraP01849 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.58□□□□□ -0.56
TcraP01849 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TcraP01849 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TcraP01849 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TcraP01849 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.58□□□□□ -0.56
TcraP01849 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
TcraP01849 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TcraP01849 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.58□□□□□ -0.56
TcraP01849 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TcraP01849 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TcraP01849 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.57□□□□□ -0.56
TcraP01849 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TcraP01849 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TcraP01849 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.57□□□□□ -0.56
TcraP01849 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TcraP01849 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.57□□□□□ -0.56
TcraP01849 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.57□□□□□ -0.56
TcraP01849 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.57□□□□□ -0.56
TcraP01849 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.57□□□□□ -0.56
TcraP01849 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TcraP01849 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
TcraP01849 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms