Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Syn1O88935 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Syn1O88935 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.24■□□□□ 0.19
Syn1O88935 Gm5177-201ENSMUST00000183092 997 ntBASIC16.24■□□□□ 0.19
Syn1O88935 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.24■□□□□ 0.19
Syn1O88935 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.24■□□□□ 0.19
Syn1O88935 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Syn1O88935 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.23■□□□□ 0.19
Syn1O88935 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.23■□□□□ 0.19
Syn1O88935 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Syn1O88935 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Syn1O88935 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.23■□□□□ 0.19
Syn1O88935 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.23■□□□□ 0.19
Syn1O88935 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Syn1O88935 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Syn1O88935 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.23■□□□□ 0.19
Syn1O88935 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Syn1O88935 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syn1O88935 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Syn1O88935 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Syn1O88935 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.22■□□□□ 0.19
Syn1O88935 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.22■□□□□ 0.19
Syn1O88935 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.22■□□□□ 0.19
Syn1O88935 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
Syn1O88935 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Syn1O88935 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syn1O88935 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Syn1O88935 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.22■□□□□ 0.19
Syn1O88935 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Syn1O88935 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.21■□□□□ 0.19
Syn1O88935 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Syn1O88935 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.21■□□□□ 0.19
Syn1O88935 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Gm12151-201ENSMUST00000121374 290 ntBASIC16.21■□□□□ 0.19
Syn1O88935 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.21■□□□□ 0.19
Syn1O88935 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.21■□□□□ 0.19
Syn1O88935 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Syn1O88935 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syn1O88935 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Syn1O88935 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Syn1O88935 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
Syn1O88935 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.2■□□□□ 0.18
Syn1O88935 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.2■□□□□ 0.18
Syn1O88935 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Syn1O88935 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Syn1O88935 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Syn1O88935 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms