Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Gm27430-201ENSMUST00000184585 107 ntBASIC17.2■□□□□ 0.34
Slc6a20bO88575 Gm44333-201ENSMUST00000197168 107 ntBASIC17.2■□□□□ 0.34
Slc6a20bO88575 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.2■□□□□ 0.34
Slc6a20bO88575 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.19■□□□□ 0.34
Slc6a20bO88575 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.19■□□□□ 0.34
Slc6a20bO88575 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc6a20bO88575 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.19■□□□□ 0.34
Slc6a20bO88575 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.19■□□□□ 0.34
Slc6a20bO88575 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Slc6a20bO88575 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.18■□□□□ 0.34
Slc6a20bO88575 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.18■□□□□ 0.34
Slc6a20bO88575 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Gm18246-201ENSMUST00000221023 728 ntBASIC17.18■□□□□ 0.34
Slc6a20bO88575 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a20bO88575 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm22065-201ENSMUST00000103753 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm22066-201ENSMUST00000103761 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm24932-201ENSMUST00000103763 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm24115-201ENSMUST00000103799 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm22190-201ENSMUST00000103827 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm22191-201ENSMUST00000103831 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm24721-201ENSMUST00000103849 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm28018-201ENSMUST00000103869 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm26399-201ENSMUST00000103937 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm25349-201ENSMUST00000177728 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm23616-201ENSMUST00000177797 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm25871-201ENSMUST00000177816 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm24752-201ENSMUST00000178240 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm24496-201ENSMUST00000178287 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm25649-201ENSMUST00000178476 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm25548-201ENSMUST00000178681 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm23147-201ENSMUST00000178841 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm26095-201ENSMUST00000179270 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm22171-201ENSMUST00000179283 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm23936-201ENSMUST00000179354 110 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms